Author Archives: mdjkf

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About mdjkf

Microbiologist and Infectious Diseases Physician

Online microbe atlas- Gram stain and culture plate photos

This resource provides free to air photos of great quality-just the thing for your presentations and learning. http://microbe-canvas.com/Bacteria/gram-positive-cocci/streptococci/catalase-negative/beta-hemolysis/pyrase-positive-2/streptococcus-pyogenes.html

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Microbial Genomics for Public Health and Clinical Microbiology- Nov 2016 symposium report

This recent symposium was a great wrap up of whole genome sequencing at its many applications organised by the Doherty Institute in Melbourne.  Here is my (short) Doherty-symposium report which will give you some idea of where things are going- a rapidly developing … Continue reading

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Human Intestinal Microbiome in Health and Disease – recent short NEJM review

Short interesting review of this cutting edge topic for your December delectation!    “Human-associated microbes have primarily been viewed through the lens of a single species and its environment. Advances in culture independent technologies have shown the enormous diversity, functional … Continue reading

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Tuberculosis- drug resistant- online learning, mailing lists and references

Courtesy of Dr Suman Majumdar, Dr Catherine Berry and others. Therapeutics Recent presentation from our advanced trainee registrar concerning the new TB drugs: Brian_Chong 2017 New TB drugs. TB drug monographs :  up-to-date clinical profiles of TB drugs including guidance on … Continue reading

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Zika transmission prevention not just for men- updated WHO guidance

As well- Zika and risk of microcephaly – see this NEJM report.

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BCG vaccine – more than just protection from childhood tuberculosis

This is a useful BCG systematic review concerning childhood protection against TB- worth reading in detail. Longterm BCG protection into adulthood – vaccine efficacy (VE) 10-19 years post BCG was 58% (95% CI 27 to 76) p=0·002 and there was still a non-significant … Continue reading

Posted in Module- Mycobacteria, Mycobacteria tuberculosis, Public health | Tagged | 1 Comment

Epidemiology – don’t be lost for words!

As part of your systematic review of a micro-organism species or group of species (e.g. Enterobacteriaceae) , knowledge about the ‘epidemiology‘ is essential,  the second element in the ORGANISM knowledge proforma. “Epidemiology is the study of the distribution and determinants of health-related … Continue reading

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Molecular microbiology – recent tutorial references and resources

Basics DNA extraction – essential first step. Quantity of DNA obtained can be assayed spectrophotometrically. Reverse transcriptase step – for detection of RNA viruses Nucleic acid amplification –  know how PCR works! This PCR animation is easy to understand.  Many other … Continue reading

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Outbreaks unpacked- recent tutorial material

The online Field Epidemiological Manual is an essential resource.  Here are the 10 steps, and 10 pitfalls list we went through. This is a great survey of the wider topic from a local leading thinker:  Outbreak-insights-looke-2012. EpiInfo is the free CDC software … Continue reading

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Lablogatory – medical pathology unpacked – a great clinical resource

Originally posted on AIMED – Let's talk about antibiotics:
If you have a curiosity about what actually goes on in a medical pathology lab. and matters pathological, then this is the site for you. There are fabulous clinical case presentations…

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